rs29942551 SNP Detail

Summary

• ID
  rs29942551
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:45863211 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACAGCCAGC CCCGTCCATC
  CCTCAGAAGG GCACATGCAT TTCCTACCTG CACAGTGATG GCTGCCTTCT TAGTCATCGT
  CTGGTACATG CCAATGAAGG CTACATTGTT GTCCAGATCA TAGACAGGGC ACTGTGGAGG
  AAGGAAGGAA GAGGCAGATG GATGGGGAAC TGGGCCCTGT CCCCTCTGCT AATGTCCCAA
  S
  TACTTTCTGA TGGAGGATAA AATGACAGAC AGCTTACCAG GACATCTTGG ATGGAGATGA
  CTGAGCAGGG GAAGGCCTTC TTGGAGGTCA CCTTGACAAT TACCGAGTCC ACACCATCAG
  GAAACTCGTA TTTGAAGTAC TGAGAACATA GGAAGGGAGA GTGTCATCTC AGGAGGGTGC
  TCTCTCTGCC CCTCCGAAGG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss46358923	mCV25173022	ABI	CRAMUS_MOUSE	f	SNP	G	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs29942551					SNP	G	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:45863211 () rs orientation: forward

Symbol	Name	Function Class
Gm68914	predicted gene, 68914	661 bp downstream
Rr678012	regulatory region 678012	1698 bp proximal
Sidt2	SID1 transmembrane family, member 2	within coordinates
Tssr89292	transcription start site region 89292	946 bp downstream
Tssr89293	transcription start site region 89293	1760 bp downstream