rs29943048 SNP Detail

Summary

• ID
  rs29943048
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:106343367 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCCAT ACCCACCTTG CTCAGGAGTG
  S
  GACGTGGGGG CAGTTCGGTC AGACA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46357962	mCV23586511	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	C	G
ss136936760	ENSMUSSNP3004544	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G		G
ss323185282	CHEV_9_106368499	CHEVERUD	SCREENING_POP	f	SNP						G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29943048					SNP	G	G	G	C	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:106343367 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22268	CpG island 22268	76 bp distal
Gpr62	G protein-coupled receptor 62	230 bp upstream
Tssr91318	transcription start site region 91318	1273 bp upstream
Tssr91319	transcription start site region 91319	1246 bp upstream
Tssr91320	transcription start site region 91320	866 bp upstream
Tssr91321	transcription start site region 91321	178 bp upstream