rs29952569 SNP Detail

Summary

• ID
  rs29952569
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:34839751 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCATT TATGTACTCT CTAAAAAGTC
  Y
  CCAGAATCCC ACATGTCACA CAATA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45379320	mCV23212559	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs29952569					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:34839751 () rs orientation: forward

Symbol	Name	Function Class
Gm52552	predicted gene, 52552	1556 bp upstream
Rr53877	regulatory region 53877	793 bp distal
Rr53878	regulatory region 53878	1985 bp proximal
Traf1	TNF receptor-associated factor 1	within coordinates