rs29956910 SNP Detail

Summary

• ID
  rs29956910
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:146697645 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGACA CAGCTCCCTT GTCTTCTCCC
  K
  GTACCACCAG GGCTGCTCCA CCCTT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45380893	mCV22537324	ABI	CRAMUS_MOUSE	f	SNP	T	T	G	T	T
ss147874140	ENSMUSSNP275965	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	G		T
ss320546292	CHEV_2_146681461	CHEVERUD	SCREENING_POP	f	SNP						G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29956910					SNP	T	T	G	T	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:146697645 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12373	CpG island 12373	within coordinates
D2Dcr102	DNA Segment, Chr 2, Derry C. Roopenian 102	1491 bp proximal
Kiz	kizuna centrosomal protein	139 bp upstream
Rr397370	regulatory region 397370	657 bp upstream
Rr566738	regulatory region 566738	within coordinates
Rr566739	regulatory region 566739	99 bp proximal
Tssr20613	transcription start site region 20613	90 bp upstream
Tssr20614	transcription start site region 20614	136 bp upstream