rs29960600 SNP Detail

Summary

• ID
  rs29960600
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:125574997 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCAG ATCACCACAG AAGACCTACG
  K
  AGTCAACTAA CCAGGGACCA TGAAG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45381236	mCV22614069	ABI	CRAMUS_MOUSE	f	SNP	T	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs29960600					SNP	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:125574997 () rs orientation: forward

Symbol	Name	Function Class
BC026863	cDNA sequence BC026863	within coordinates
Cpgi12201	CpG island 12201	943 bp distal
Rr397270	regulatory region 397270	1030 bp downstream
Rr564273	regulatory region 564273	256 bp distal