rs29968669 SNP Detail

Summary

• ID
  rs29968669
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:3471407 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAAATTATT CCAAGGATGA
  GTCCAGTGGT GCAGACTTGT AATCTCAGCT CCTCAGATGG CTAAAATGAA GAGGATTCCA
  TGTTCAAGAC TCTTCTGGGC TTCAGAGTGA GCTCAAGGCC AACCTGTGCT ACTTTAGCAA
  GGCTTCATTT CAAAATGAAA AATTAAGGGC TAGGGACTAT AACTCAGTGG TAGGGCACTT
  R
  CCCAGTTCAT GCTCCATCAG TGAAACTGGT AACTAAGATG CAGGTATTAG ACATACACTG
  AGAATGACAG GAACACGATG CATCACTGTG GAAGAGCACC TGCTCCAGAA AGATGAGGAC
  CCAAGTTCCA GTCCCAAAGG TCATAAGAAG CCAAGGAAAG TCGCATGCAC CTCTAATCCC
  AGTGCTGCTG GACACAGACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45382636	mCV23518798	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
ss146262174	ENSMUSSNP3004894	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		A
ss320204623	CHEV_2_3387642	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29968669					SNP	G	A	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:3471407 () rs orientation: forward

Symbol	Name	Function Class
Gm13184	predicted gene 13184	within coordinates
Suv39h2	suppressor of variegation 3-9 2	within coordinates
Tssr15896	transcription start site region 15896	1757 bp downstream