rs29971964 SNP Detail

Summary

• ID
  rs29971964
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:82945058 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACGCC TTACTACCCC TGGCAATAGA
  R
  GATGGGCTCC AGCAGTTCAA ACAGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45879947	mCV23178623	ABI	CRAMUS_MOUSE	f	SNP		A	G					A		A
ss60904302	NES15955776	PERLEGEN	MM_PANEL2	f	SNP	A		G	G	G	G	A		A	A	G	G		G	G	G	G		G
ss133345821	ENSMUSSNP5772508	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G							A
ss321843760	CHEV_6_82918071	CHEVERUD	SCREENING_POP	f	SNP													G					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs29971964					SNP	A	A	G	G	G	G	A	A	A	A	G	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60904302	NES15955776	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:82945058 () rs orientation: forward

Symbol	Name	Function Class
D6UmiJ16	DNA segment, Chr 6, University of Michigan Jones 16	225 bp proximal
M1ap	meiosis 1 associated protein	within coordinates
Rr632712	regulatory region 632712	1277 bp proximal