rs29976443 SNP Detail

Summary

• ID
  rs29976443
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:48231217 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AACAAAGGGA TGGCTGTGTT TTTTCCACTG AACAAAAATA
  TGTCGTTCAG TATCCAGAAG GATGTGAGTT TTAAAGGGCC CGGCTCCGTG ACGATCAAAA
  W
  ATTTTAAGGC TGATGGGAAA CAAACCAATA AAACTTTTAA CAAAAAGAAA TAGCATCATT
  TTACAGTGCA TACAATCTGT AAAACTCTGT GACTTCTAA                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46360594	mCV25187606	ABI	CRAMUS_MOUSE	f	SNP	T	T	A	T
ss136451625	ENSMUSSNP766079	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		T
ss322953173	CHEV_9_48128000	CHEVERUD	SCREENING_POP	f	SNP					T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29976443					SNP	T	T	A	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:48231217 () rs orientation: forward

Symbol	Name	Function Class
Nxpe2	neurexophilin and PC-esterase domain family, member 2	within coordinates
Nxpe4	neurexophilin and PC-esterase domain family, member 4	within coordinates
Tssr89370	transcription start site region 89370	541 bp upstream