rs29977414 SNP Detail

Summary

• ID
  rs29977414
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:7182525 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCCTTATT GTCCCTTTAA
  ATCTGTTCTA TGAACACATT TTTCTCAACA CCTTGAGCAA AATTCAGTAA AATATCATAT
  TGCAGCAGTG CTGCTCTCTG CTTGGTTCTA TATAATACAT TTCTTTACTA GGGACTTCAG
  GTAGTCTCAG GACTTGAACA GGAATGATAT ATCAATTCAG GAAAGAACCT TTAACCACTA
  S
  CACAGGATTC ACTGTTATCA TTTCATAGGT ATCATTGTGA TGATGACACT CAATGTCAGT
  CTGCCCCACA GAAATCCAGT CACAAGGCCA ATACAATGGC TGTGGTCCAG TACACTGCTA
  TAGGATGAGT AGAACAAGGA GCAGGTGTTA CCTAGTGTGT ATCTCTGTAT TGCTCTTCAA
  TATTAGTTCC TGAGTGCTGT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46360005	mCV24459673	ABI	CRAMUS_MOUSE	f	SNP	C	C	G	G	G
ss136190395	ENSMUSSNP1498283	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	G		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29977414					SNP	C	C	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:7182525 () rs orientation: forward

Symbol	Name	Function Class
2610019N06Rik	RIKEN cDNA 2610019N06 gene	855 bp downstream
Cpgi21340	CpG island 21340	1704 bp proximal
Dcun1d5	defective in cullin neddylation 1 domain containing 5	1995 bp upstream
Rr206698	regulatory region 206698	875 bp proximal
Rr401240	regulatory region 401240	1788 bp upstream
Tssr83672	transcription start site region 83672	1989 bp upstream
Tssr88061	transcription start site region 88061	1915 bp downstream