AATAG CCCATTCCTT TTTATCAGAT Y TTAGGGGGAA GAAAATAGCA AGCGG Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|---|---|---|
ss46360312 | mCV23576835 | ABI | CRAMUS_MOUSE | f | SNP | C | C | C | T | C | ||
ss136905124 | ENSMUSSNP521327 | ENSEMBL | ENSEMBL_Sanger | f | SNP | C | ||||||
ss323172167 | CHEV_9_104921410 | CHEVERUD | SCREENING_POP | f | SNP | C | C | |||||
SNP Consensus Information | ||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
LG/J |
SM/J |
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rs29978220 | SNP | C | C | C | T | C | C | C |
Location: Chr9:104896279 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Cpne4 | copine IV | within coordinates | ||||||
Tssr86830 | transcription start site region 86830 | 702 bp downstream | ||||||
Tssr86831 | transcription start site region 86831 | 672 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/10/2024 MGI 6.24 |
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