rs29981191 SNP Detail

Summary

• ID
  rs29981191
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:13722699 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTAGCCACC AATCAAATCT
  AAGATTGTAG TTTAAGTAAT TAGCCTTGTG AGCTGACAGG AAATGCTCAG GGGTGACACG
  GGCTGGATAT GCTTGTACAT ATGTGTGTGT GTGTGTGTGT GTATATATAT ATATTTATAT
  ATATATATTT ATTCATATTC ATTCTCCCTT CATGGACACC CATGTTACAA GGTTGTGAGA
  M
  TTTAGAAATA ACGAGATAGG CTGGGAGGCT TAGTGCACTT GCAGTTATCC CAGAGGACCT
  GAATTCAGTT TCCAGTATTG CTGAGCAGTT CACAACTGCA GGCAATAATA TCTCTAAGGA
  ATCCAATACC CTCTTCTGCC CTCTGCAGGT ATGGCATGCA TGTGTACACA CACACACACA
  CACACACACA CACACTCACA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss47400481	NES11509734	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	A	C	C	C		A	C	A		C
ss322508958	CHEV_8_13672699	CHEVERUD	SCREENING_POP	f	SNP											C				A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs29981191					SNP	C	C	C	C	C	C	A	C	C	C	C	A	C	A	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47400481	NES11509734	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13722699 () rs orientation: forward

Symbol	Name	Function Class
4930442M18Rik	RIKEN cDNA 4930442M18 gene	227 bp downstream
Rasa3	RAS p21 protein activator 3	Intron
Rr400766	regulatory region 400766	1947 bp upstream
Rr659980	regulatory region 659980	727 bp distal
Rr659981	regulatory region 659981	287 bp proximal
Rr659982	regulatory region 659982	622 bp proximal
Tssr76418	transcription start site region 76418	1790 bp upstream