rs29981683 SNP Detail

Summary

• ID
  rs29981683
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:139437365 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAAGACATGT ACAACAATCA CATGAAAATA TGAATAATAT
  AATATTTAAA GTATGTATGA CGATATACAG GACACACATG AAAACATGCG GAACACATAT
  S
  AAGATATCCA TGATGGTGCA CAGAGCCCAC ATGAAGCGAC ACATATACAC AGTCATCTTT
  AAGGCATTGC CTATTAAACA CAGCTAAGCA AGTATGTCA                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45883560	mCV24083651	ABI	CRAMUS_MOUSE	f	SNP		G	G					C		G
ss48128503	NES11845121	PERLEGEN	MM_PANEL2	f	SNP	G		G	G	G	G	G		C	G	G	G		G	G	C	G		C
ss133916364	ENSMUSSNP3948933	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G							G
ss322019561	CHEV_6_139408888	CHEVERUD	SCREENING_POP	f	SNP													G					C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs29981683					SNP	G	G	G	G	G	G	G	C	C	G	G	G	G	G	G	C	G	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48128503	NES11845121	PERLEGEN	MM_PANEL	f	SNP	C/G