rs29987659 SNP Detail

Summary

• ID
  rs29987659
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:121744607 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGCC GTCTTTTTCC AGGTTTTGCT
  Y
  CACAGAGAGT CTCTGATGGA AGAGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss46363001	mCV23339849	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
ss137070853	ENSMUSSNP4838388	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
ss323232580	CHEV_9_121824659	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs29987659					SNP	T	C	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:121744607 () rs orientation: forward

Symbol	Name	Function Class
Cyp8b1	cytochrome P450, family 8, subfamily b, polypeptide 1	within coordinates
Tssr92081	transcription start site region 92081	840 bp upstream
Tssr92082	transcription start site region 92082	677 bp upstream
Tssr92083	transcription start site region 92083	357 bp upstream
Tssr92084	transcription start site region 92084	747 bp downstream