rs29990002 SNP Detail

Summary

• ID
  rs29990002
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:80157745 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTTAC GCTGAATAGT AAGAAACTGT
  W
  CATGCCCCAC CCCAAATACA GTGAT                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46362653	mCV22773836	ABI	CRAMUS_MOUSE	f	SNP	A	A	T	A
ss136684218	ENSMUSSNP5471539	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		A
ss323021787	CHEV_9_80098270	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29990002					SNP	A	A	T	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:80157745 () rs orientation: forward

Symbol	Name	Function Class
Myo6	myosin VI	within coordinates
Rr201868	regulatory region 201868	1656 bp proximal