rs29991250 SNP Detail

Summary

• ID
  rs29991250
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:30308496 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGATGGTTGA CAAGAGACCT
  AAGTCCCACA ACTATCTTCC TTCCTCTACA TATCCACTAT GGCAAGCGTG TGCCCACGCA
  CATAGACACA CACACACAAA ATAAATGTAA TAAAAACATT TGATAGCAGA ATTACAAAAA
  GACTGTAATT TTAATCTATT TCTATCTTTT TAGTTGTCAT CTTCTTTCAC CCTTCTAGGG
  Y
  CATGTATAAT TATTAAATCA GTTTTTTTTT TCCTCCTGAG TACTTTCTGA GAGTCCTTCG
  CATCTGTAAG CGCTTGCACA GTAATTGATC TGAGGTATTT ATTTCGGGAA TTTAATTTAG
  GTGTTCTTGG GGAGCTGGTA TAAATTTTTA CAGCCACAAG AGTGTTAATT TTATCACTGC
  TTTCTGTTGA GACTACATTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	MOLF/EiJ	PWD/PhJ
ss49089316	NES12419256	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	MOLF/EiJ	PWD/PhJ
rs29991250					SNP	T	T	T	T	T	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49089316	NES12419256	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:30308496 () rs orientation: forward

Symbol	Name	Function Class
Gm61363	predicted gene, 61363	within coordinates
Rr388193	regulatory region 388193	52 bp downstream