rs30004430 SNP Detail

Summary

• ID
  rs30004430
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:60803838 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTTGC CACGGAACCT CCCAGCCCCC
  R
  TCTAGCCCCA TCCCTTTGTG GTCTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39140510	mCV25282103	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	A
ss149094388	ENSMUSSNP883301	ENSEMBL	ENSEMBL_Sanger	f	SNP	G			A
ss324366855	CHEV_13_60757385	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30004430					SNP	G	G	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:60803838 () rs orientation: forward

Symbol	Name	Function Class
Dapk1	death associated protein kinase 1	within coordinates
Rr273140	regulatory region 273140	1638 bp distal
Rr276884	regulatory region 276884	within coordinates
Rr284608	regulatory region 284608	1402 bp distal