rs30004707 SNP Detail

Summary

• ID
  rs30004707
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:129872454 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCTT TCTCTTACTC CTCCATTGGG
  K
  TTCCCATGCC CAGTCCGATA ATGGT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45384710	mCV22732287	ABI	CRAMUS_MOUSE	f	SNP	T	T	G
ss135891533	ENSMUSSNP7194426	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		G
ss320964154	CHEV_3_129781723	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30004707					SNP	T	T	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:129872454 () rs orientation: forward

Symbol	Name	Function Class
Gm42663	predicted gene 42663	1974 bp upstream
Rr585128	regulatory region 585128	1071 bp proximal
Rr585129	regulatory region 585129	1186 bp proximal