rs30008050 SNP Detail

Summary

• ID
  rs30008050
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:97553206 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGCTG CTGTTCCAGA GGTCCTGAGT
  Y
  CAATTCCCAG CAACCATATG GTGGC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39141179	mCV23739675	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T	C
ss145035294	ENSMUSSNP2662579	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C		C
ss324496779	CHEV_13_98186653	CHEVERUD	SCREENING_POP	f	SNP						C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30008050					SNP	C	C	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:97553206 () rs orientation: forward

Symbol	Name	Function Class
Rr274314	regulatory region 274314	406 bp distal
Rr277788	regulatory region 277788	595 bp proximal
Rr285518	regulatory region 285518	407 bp distal