rs30012235 SNP Detail

Summary

• ID
  rs30012235
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:52748678 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATAT TGCGTTTGGG AGTGGGGACT
  R
  TTTTATATAG GAAACCCTCT CCCTC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	LG/J	SM/J
ss39637584	mCV23703079	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss147124990	ENSMUSSNP4080431	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss325623454	CHEV_18_52775260	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	LG/J	SM/J
rs30012235					SNP	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:52748678 () rs orientation: forward

Symbol	Name	Function Class
Tssr151055	transcription start site region 151055	302 bp upstream
Tssr151056	transcription start site region 151056	418 bp upstream
Zfp474	zinc finger protein 474	309 bp upstream