rs30017345 SNP Detail

Summary

• ID
  rs30017345
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:43816340 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCCCCTCCCC CTTCTTTATA ACCCCGTGTT TCTGAATATT
  ATAATTGAGC TTTGATCAGG ATCTTGTTTT AGCTCTGTTC TTTCTCTCAT CCATCTAGTT
  Y
  CCTCTTTCAG CCCGAGTCTG CTGCTTCAGC CATACCCCAT TCCTTGTGAG CCGCTGGACA
  GCCCACAACA GTTTGGTGCC TGAACAGGGA CCTGAAGAA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45887086	mCV24667729	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss133132556	ENSMUSSNP5915617	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss321787558	CHEV_6_43789405	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs30017345					SNP	C	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:43816340 () rs orientation: forward

Symbol	Name	Function Class
Gm35163	predicted gene, 35163	within coordinates
Rr144146	regulatory region 144146	131 bp distal