rs30017884 SNP Detail

Summary

• ID
  rs30017884
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:36070125 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCATAAATTA AACTGAGACA TTTATAGATA TTTTACAAGG
  CATCTCTTCC TTCCTCCCTT TTATTTTATT TAATTTACCT CGAGACAAGG TCTCCTGTAA
  R
  CCAGACCGTC CTGGACCTTG CTCTGTATCT GCGAATGGCC TTGAACTCCT GATCCTCCTG
  CTTCTCGCTC TCAGACACTG AGATCTCATC TGTGCGGCC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss39142661	mCV24198986	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss324315042	CHEV_13_35978011	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs30017884					SNP	G	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:36070125 () rs orientation: forward

Symbol	Name	Function Class
Rr271494	regulatory region 271494	925 bp distal
Rr271495	regulatory region 271495	76 bp proximal
Rr283230	regulatory region 283230	563 bp distal