rs30018625 SNP Detail

Summary

• ID
  rs30018625
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:134097546 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACTCAAAAAT GTTTTTTTAA ACAGTGGTTC AGATCAGTGG
  GATTTCTGTT TAGGTCACAG AACACTCAGG GTCATACCCA GGGATTTCCA TTCTCTGAAT
  K
  TGTCTGTAAT CTAGATTTAA CACTCAAGAC CAGTCTCTGA AACTTGACTG ATTGACTGGT
  TAATTGATTG ACTTTTTTTT TCCATGTCTG ACAAAAGAA                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
ss45886020	mCV24118110	ABI	CRAMUS_MOUSE	f	SNP	T	T	G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
rs30018625					SNP	T	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:134097546 () rs orientation: forward

Symbol	Name	Function Class
D6Mit374a	DNA segment, Chr 6, Massachusetts Institute of Technology 374a	960 bp distal
D6Mit374b	DNA segment, Chr 6, Massachusetts Institute of Technology 374b	960 bp distal
Etv6	ets variant 6	Intron
Rr639573	regulatory region 639573	1089 bp distal
Rr639574	regulatory region 639574	within coordinates