rs30021069 SNP Detail

Summary

• ID
  rs30021069
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:132289832 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        TTAAA ATATAAGAAA ATGATTTATA
  Y
  ACAATAAAGC TTCCTGAACT ATTAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss45886836	mCV24778885	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C
ss133730198	ENSMUSSNP3059664	ENSEMBL	ENSEMBL_Sanger	r	SNP		G		G
ss321965807	CHEV_6_132262887	CHEVERUD	SCREENING_POP	r	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs30021069					SNP	C	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:132289832 () rs orientation: reverse

Symbol	Name	Function Class
Prb1b	proline-rich protein BstNI subfamily 1B	within coordinates
Tssr2031	transcription start site region 2031	1882 bp downstream