rs30024462 SNP Detail

Summary

• ID
  rs30024462
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:4419580 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCCCT TATGTCAATC GCTGTGTCTT
  R
  TGGAGTTCTC CTTTCCAAAT CTCCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45888046	mCV24014902	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A	G
ss132931576	ENSMUSSNP932753	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G		G
ss321727413	CHEV_6_4369580	CHEVERUD	SCREENING_POP	f	SNP						G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30024462					SNP	G	G	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:4419580 () rs orientation: forward

Symbol	Name	Function Class
Gm33788	predicted gene, 33788	1957 bp upstream
Gm66440	predicted gene, 66440	within coordinates
Rr626015	regulatory region 626015	1738 bp distal
Rr626016	regulatory region 626016	within coordinates