rs30026363 SNP Detail

Summary

• ID
  rs30026363
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:29228483 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATCAGAAGC CCATGGACAA
  TTTTTTTTTT TTTTTTTAGA GTTTAAAAGA AAAATTCCAG GGCAGGCAAG CTGTAAACCT
  CAGTAGCTGC CCAGAGGAGG AGAAAGGGGA AAAGGACCAA AAAGGCCACA GCAGTTGAGT
  TGAACCAGCA TGGAGGTCAG ACACATGTCC GGACAGGCAT CTGCATGGTC AGGCACAGAC
  Y
  CTAAGCCAGA GTGTCAGCCA GTGAGCATGA TTAGAAGAGA GACGAGAACT ATCGTGCTTT
  CCTGCACGGT GGAAAGAAGT GTGCAGATGT AGGAAGCTGC AAGTGCGGCT CTGGCAGAGA
  CTGCCCGCAC TGAGGTTTTA GATCTGCTAC TTTTCTTGGT ACTCTGACCA AATAGCTGAT
  GAAGCAACTT GAGGGAGGAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49093201	NES12399922	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30026363					SNP	C	C	C	C	C	C	C	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49093201	NES12399922	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:29228483 () rs orientation: forward

Symbol	Name	Function Class
Rr388183	regulatory region 388183	within coordinates