rs30028320 SNP Detail

Summary

• ID
  rs30028320
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:63415803 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCTCAGGAA AAAACCCTTA
  AAAAACAAAA CAAAGGTTAA AACAAATAAT CAATAAGACA AAAAACCAAA ATCAAACTAA
  CAACAACAAC AACAACAACA AAAAAACCCA AAAAACCAAA ATCAACAAAA CAAAAGCATA
  CACACAAAAA ACATTGAGTA TGTTTTGTGT TAGCTAACGA CTCCTGGGCT TGGGGCCTAA
  Y
  CTGGAGTGTG GTTGATACAT CTAGTGACAC CTTGATTCCC CCTCCACACA CAGCAGCTAT
  GTGTTGCCAA TAGCTTGTTG GTTAGAGGTG AGACTTCTGT GTCCACTTTT CCATTTCTGT
  GTATGGATTT TGTCTAGTTT GAACCTGGGT GGGTCTTGTT CAGGCTTCCA AGGTTTCCAT
  GAGCTCACAG CCTGTTGTGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	CAST/EiJ	MOLF/EiJ	PWD/PhJ
ss47405520	NES11047905	PERLEGEN	MM_PANEL2	f	SNP	C	T	C	C
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	CAST/EiJ	MOLF/EiJ	PWD/PhJ
rs30028320					SNP	C	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47405520	NES11047905	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:63415803 () rs orientation: forward

Symbol	Name	Function Class
Gm71047	predicted gene, 71047	743 bp upstream