rs30031183 SNP Detail

Summary

• ID
  rs30031183
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:52582916 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAATAACAAG AAAATGGATC
  CACGCCAGCC CAGTGAAAGC AAGCTATGTT AATATCCATC CTTCTATCAC ATCAAACAGA
  TGAGGTTAAA ATGTCTTCCT CCTGGGGCTG GAGATGTGAG ATTGAGTGTT TGGTTTTGAG
  TTTTTTTTTT AAATCACTAA TTTATATTTG CTGCTGCCTT CAGGTCAAGC TAGTTGCTCA
  Y
  TCTCACTTCA GTACCTAATA CTCAATAGAA GTCCATCTCA GGTCAATGTC ACAATTTCCT
  ATACACAATT TAGTGACCAC TTAGGAATTC TAGTCAAACT AGGAGGGTTA TAGTGAGTAG
  CAATAAGGAA ACAAGTACAA GGTGATTAAA ATTTTAGGGG AAAGGAGAAT AAGACTTAAT
  GAAGCACACT TGCTTTGCAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	C57BL/6J	DBA/2J	FVB/NJ	NOD/ShiLtJ	PWD/PhJ
ss46365647	mCV25222817	ABI	CRAMUS_MOUSE	f	SNP		C	T		T	T
ss61398450	NES16787238	PERLEGEN	MM_PANEL2	f	SNP	C			T			T	T	T
ss136500078	ENSMUSSNP716026	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T			T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	C57BL/6J	DBA/2J	FVB/NJ	NOD/ShiLtJ	PWD/PhJ
rs30031183					SNP	C	C	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61398450	NES16787238	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:52582916 () rs orientation: forward

Symbol	Name	Function Class
AI593442	expressed sequence AI593442	1426 bp downstream