rs30034408 SNP Detail

Summary

• ID
  rs30034408
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:25778205 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGATGGAGT TCTAGAAGAC
  TAGCTATAGA ACAAGGCTGT GGCTAGGTTT GGAATTTCAG GTTAATATTT TTTTGAATTT
  ATGCTTCTTA TTTATAAGAG GAAAGAAATG CTATCTATTG TATGTATTTC AACTTTGCCA
  AAGGGCTCCA TATCAAATTG CATGATATAG AATAACCTTT CCATAACAGC CAGTCACACG
  R
  TGTGTTGTTA CAGACACCAA GTCACTTACA GTTAGTCTGA ATCCACTCAG CTCCAAGGAT
  CATAAGTACC CATTGTCATT CACATTTTTC TAACAGCCTC TAAGATTTAG GGCTTTATCA
  ATAATGACTT TTATATAGTC ATAATTTGAT GAGTTTTTTT TTATATTCAG CAATCAATGC
  TACTCAAAGC TTTCAGCCAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss47406982	NES11358137	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G		A	A	G	A		G
ss324304513	CHEV_13_25686091	CHEVERUD	SCREENING_POP	f	SNP								G					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs30034408					SNP	G	G	G	G	G	G	G	G	A	A	G	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47406982	NES11358137	PERLEGEN	MM_PANEL	f	SNP	A/G