rs30034521 SNP Detail

Summary

• ID
  rs30034521
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:75638792 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAAATAGTC TAATCAAGGT
  TAATTTAAGT GTTTGGTTTC TGCCTAAGCT TTATCTAAAT ATTACACAAT AGTTAAAAGT
  ACCCCACTGG TTTAACTGAC CTTCTGAATG TTCAGTAACT CTATGTGGGG ACAATTCTGA
  TGTGGTCAGA GGGGTTAAAG GAAAATACTT TATTTCCTAC TCTCTGAGGC CAACAAGGTC
  Y
  CTAAGACTGT GGTTCATCCG CAAAATGCCC TTCATCCCTG GAGAGTTACC TGTAGGCCAT
  GGAGACCCCA CTGGGTGGAC TCTAAGCAGT GTCCAATTAC AAAGAAGAGG GTGAACACAA
  GGGAAAACAT GTCCCCCATG CTTCTCAGCA AAGCCACAGT CGAGCAAGGC TTCTGGCATG
  TCTTTGAGGA GATGGAACAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47905831	NES11933933	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	C	T	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30034521					SNP	T	T	T	T	T	C	T	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47905831	NES11933933	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:75638792 () rs orientation: forward

Symbol	Name	Function Class
Rr223501	regulatory region 223501	1227 bp proximal