rs30036341 SNP Detail

Summary

• ID
  rs30036341
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:75640650 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTACAATGAG TACACGGGGG
  AGGTGCTTCC TGTCTCATCC CACAACCCCA CTCAGTAGGA AGAAGTCAAA TTTAGTTATC
  ATCCAAACTC CCTCAGTGGC AGTTGGGGTG ACCTCTTCAG AGGGGGATAA GGAGAACAGG
  CAGTAGAAAT GGGACAGGGA GTTCAGGACA GGAAACTCAA AAGTGTCCTT GAGTCACCAA
  S
  AAGAAATGCC AAAGTGGGGC TCTGAGTTCT TACTTCCTCT TGAATGAACA TCCCTGCCTA
  GACACTATAC ATGATAAAGG TTAAACACCA TCAGCACTGC CACCACCTCC ACTGCCACCA
  CCACCTCCAC CAATTAGCAC CACCACAATT ACTACCATCA GTATCACCAT CACCACCCCA
  ATTCCCTTAT CCCCTATCTC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47905851	NES11933836	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	C	G	G	C	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30036341					SNP	G	G	G	G	G	G	G	G	C	G	G	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47905851	NES11933836	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:75640650 () rs orientation: forward

Symbol	Name	Function Class
Rr223501	regulatory region 223501	156 bp distal