rs30037067 SNP Detail

Summary

• ID
  rs30037067
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:115454102 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTCATCTT CGATGCTGAC
  GAGTCCCCTG TCTGGAGCAA CCACACATAC TGGAATGAAT TAGCCATCGA GAAAGGCGGA
  GATGGAAGCG TGGGGTGGAA CCCAGTGAAG TGAGATTATT TTTCCCTCCC ACTCGCTCTC
  CAGCAGTGGA TGTTTTCCGG TTATCTCTGC TTTGACTCTA GCTGTTTGAT CCTCAAAGTC
  R
  AAGAATGGCT TCCGCACAGT TTTATAGTAC TAGAGATGCC AGCTGCAGCC ATAAACTCCT
  CCAGTTCAGC CGTATCTGCT TGCCATATCC TGAAAATATA TTTGGCTGTA TTTTCTCCCT
  GCACACCTAT ATGTTGTGCC CTCCAGGGAC AGTCCTCCTG TGCACTGTTC TCTTTCCCTT
  CCTGTTAAGC CCACCATGCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46367731	mCV23199470	ABI	CRAMUS_MOUSE	f	SNP		G	A					G		G
ss50798482	NES14206635	PERLEGEN	MM_PANEL2	f	SNP	G		A	G	A	G	A		G	G	G	G	G	G	G	G	G
ss137015217	ENSMUSSNP4938210	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A							G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30037067					SNP	G	G	A	G	A	G	A	G	G	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50798482	NES14206635	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:115454102 () rs orientation: forward

Symbol	Name	Function Class
Gm68175	predicted gene, 68175	within coordinates
Gm68176	predicted gene, 68176	within coordinates
n-R5s92	nuclear encoded rRNA 5S 92	1566 bp downstream
Rr370673	regulatory region 370673	736 bp downstream
Rr687898	regulatory region 687898	599 bp distal