rs30037893 SNP Detail

Summary

• ID
  rs30037893
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:45977811 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGATAGCTT TGTTTTAGAT
  TTATGTTACT TTTAAATAAA GAAATCTCCT GTATAATGGA GGATGGTCCA CAATTCCTCC
  TCCTCACTCC TCCTTTCCCT CCTCCTCCCT CCTTCTTTCC CTCCTCCTCC CTCCTTTTTG
  TGTAAGTCTT ACCCTTCTGT CTTTGCTCCT GAATGCTGGG ATTACAGATC AGTATTACTA
  Y
  GCCCAGCTTA TTTTGTTTTT GATTTCTGAA GCATGTTGTT TAGTAGCTCA GGCTGGCTCT
  GGACTGAATG ATCCTCTTTC CTCAGCTTCT CCAGTGCTGG GATTACCACA GTGAGTGCTT
  CCATGCTGGG GTTGATGTTA ATTTTAAATT GTACACACTT TGATATAGAA ATGAATGTAT
  GTCTTTTGTA CTAATTTAAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46367058	mCV25176548	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss136422452	ENSMUSSNP4952311	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30037893					SNP	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:45977811 () rs orientation: forward

Symbol	Name	Function Class
Gm46110	predicted gene, 46110	within coordinates
Rr383304	regulatory region 383304	1993 bp upstream
Sik3	SIK family kinase 3	within coordinates