rs30041143 SNP Detail

Summary

• ID
  rs30041143
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:78478634 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCCGGGGTG GGGTGGGGTG
  GGGAGGGCTA CCATTTAAGG AGGACGGAAA CGGTGGACAC AGACCAGAAG GAGCTATGAA
  ATCAGAAGCA GCTACATGTG AATAGACAGT CCAGCACGCC TATAGGATCA TGTTCTAGAC
  AATGTAAAAC ATATACATCA TATACATATA CATATACATA TACATACACA TACACAGTTA
  Y
  AACTATGCAG ATACTGAGGA ATATAAGATG CCACTTGGTA TGAGAGCCAA GTATGTGGTG
  CATGCTGGAA TCCCAGCACT AGAGAGGCTG ATGCAGGAGG CCAGCGGGTA TGGGCATGCT
  TGTTGAAATA AGAATGAGGC TTTTCATAAT TTTATATATT ATAAACAATT GTTTTATAAA
  TAAAACAATA CATTTTAACC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46367479	mCV25044148	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss136668618	ENSMUSSNP4017674	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30041143					SNP	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:78478634 () rs orientation: forward

Symbol	Name	Function Class
Slc17a5	solute carrier family 17 (anion/sugar transporter), member 5	within coordinates