rs30042960 SNP Detail

Summary

• ID
  rs30042960
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:110467129 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTGAC TCTCCATGCT CTCACCCCAC
  M
  CTGGGCCACA TGAGAAGGAC GGGAA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46368153	mCV25039879	ABI	CRAMUS_MOUSE	f	SNP	A	A	C	A
ss136958667	ENSMUSSNP7239508	ENSEMBL	ENSEMBL_Sanger	f	SNP		A		A
ss323193670	CHEV_9_110540565	CHEVERUD	SCREENING_POP	f	SNP					A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30042960					SNP	A	A	C	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:110467129 () rs orientation: forward

Symbol	Name	Function Class
Mir8107	microRNA 8107	1946 bp upstream
Nbeal2	neurobeachin-like 2	within coordinates
Rr198752	regulatory region 198752	within coordinates
Rr198753	regulatory region 198753	671 bp proximal
Rr202597	regulatory region 202597	1564 bp distal