rs30046829 SNP Detail

Summary

• ID
  rs30046829
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:75987182 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATACT CTGGTTCTAC TGTGGAGCTG
  S
  TTGCTTGCTT GGAAAGGTGC TTCAG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39145345	mCV22680294	ABI	CRAMUS_MOUSE	f	SNP	C	C	G	C
ss144639060	ENSMUSSNP4392142	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		C
ss324437222	CHEV_13_75976511	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30046829					SNP	C	C	G	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:75987182 () rs orientation: forward

Symbol	Name	Function Class
Glrx	glutaredoxin	822 bp upstream
Rr482792	regulatory region 482792	1203 bp distal
Rr482793	regulatory region 482793	315 bp proximal
Tssr120401	transcription start site region 120401	811 bp upstream
Tssr120402	transcription start site region 120402	834 bp upstream
Tssr120403	transcription start site region 120403	939 bp upstream
Tssr120404	transcription start site region 120404	1008 bp upstream