rs30050836 SNP Detail

Summary

• ID
  rs30050836
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:86121977 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGTGTTTCAA AAATCTTAAA CATCAAGTTT TACTGATAGA
  CAACCTTAAT TAAAGAAAGT TTAATTTAGC CGAGGAACAA ATACCTTCTA ATATTACTAT
  R
  CAACATACAA TTTTCCCACT TCTACTGTAG TTCAATTCAT TTCAATTATA CTCTGGAAAT
  TATAATTTTA CAATTATAAT GTTAATTATA ACTTCTAAT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45389022	mCV24506459	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss135445347	ENSMUSSNP521478	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		G
ss320829365	CHEV_3_86018592	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30050836					SNP	A	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:86121977 () rs orientation: forward

Symbol	Name	Function Class
Gm66037	predicted gene, 66037	within coordinates
Rr397748	regulatory region 397748	93 bp downstream