rs30051068 SNP Detail

Summary

• ID
  rs30051068
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:127796944 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGCCCTGAC ACTGTGGTGC
  GAGACCATGA TTCATACGAA AGGCAGCATA ATTACTGTGA AGAGCAGATT GGATTTCCAA
  ATGAGGAAAG CGCATTCTAG TTCTTTCTTG GCTACGGATA AACACAATTG ATTTATGATG
  AATATGAGGG TCCTGGTTAT CTGGCAAATG TATTGTATTT CATGTCGAAT AAGCTTAGAG
  R
  TTTTTTTTTA TTTTTTTATT TTTTGCATGT CTACATGAAA CCCAATCTGT GCACAACCAG
  GAGAGCCCGA AGGAATGGTG GCTGGAACTC CTGATGGATG GGAGGAGTGC CACACCGGGC
  ACTCCAGAGG GCAGCATATC TGCTTCCCAC CAGCAGTGAG ACCACTGTGT GCCTCAGTTT
  GAATAGCAGA GAAGCGTAGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45389124	mCV25235068	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss320959105	CHEV_3_127706213	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs30051068					SNP	G	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:127796944 () rs orientation: forward

Symbol	Name	Function Class
Rr52	regulatory region 52	within coordinates
Rr584916	regulatory region 584916	926 bp distal
Rr584917	regulatory region 584917	1213 bp distal