rs30051977 SNP Detail

Summary

• ID
  rs30051977
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:46667533 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTATT TGGGAGTTAG TCTTGGACTC
  W
  GACAGAGGTT GGTAATAGTT CAGTA                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	LG/J	SM/J
ss39145500	mCV23699851	ABI	CRAMUS_MOUSE	f	SNP	A	T
ss324333760	CHEV_13_46609426	CHEVERUD	SCREENING_POP	f	SNP			A	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	LG/J	SM/J
rs30051977					SNP	A	T	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:46667533 () rs orientation: forward

Symbol	Name	Function Class
Cap2	cyclase associated actin cytoskeleton regulatory protein 2	within coordinates
Rr272096	regulatory region 272096	1733 bp distal
Rr276207	regulatory region 276207	within coordinates
Rr283800	regulatory region 283800	312 bp proximal