rs30052169 SNP Detail

Summary

• ID
  rs30052169
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:36393714 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCAGCTACC ATCCAAGCCC
  AGATCAAGTG CTTTAAGCTA GTCCACCACA ACATCTATCT TATCTATGAC CTGCTGGAGC
  AGGTAAAAGG GCTAGTAATG CAGGTCCAAA ACTGTAGGAT CTCAATGACA CAGAACAACA
  ACAGGCTTTC TGAGAGGAGT CCCAGTGAGG GTCCAGCATT GATAGTGGAG CAGAAAGAAG
  M
  CCATGTCCTG GAAACAGACC AATTACTTAT TGCAGTGAAC ATTTGCAAAT AGAACTATGT
  GGACAAAAGG GTATTCTGTC TGACACACAG TGACATGCTA TAGCTTCTTC CACACTTTTT
  TTTTTTCCTA TCAAATTTTC TTTTGGAGGG GAGCTTACAA GGACAGAGAA TGGATACTAA
  GGGACAAGAT GAATGTAATT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss39145835	mCV22952765	ABI	CRAMUS_MOUSE	f	SNP	C	A	A
ss148872071	ENSMUSSNP859625	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs30052169					SNP	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:36393714 () rs orientation: forward

Symbol	Name	Function Class
Fars2	phenylalanine-tRNA synthetase 2, mitochondrial	within coordinates
Gm40912	predicted gene, 40912	within coordinates
Rr279014	regulatory region 279014	175 bp distal
Rr286029	regulatory region 286029	1219 bp proximal