rs30052471 SNP Detail

Summary

• ID
  rs30052471
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:38333666 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAGTATGCG GAATGGACTT
  GAACAAAAAA CAGAACAAAG TTGAGCCTGG TGGAGCAGGC CTGTTGTTCC AGGTGCAGGG
  GGAGGTGAGA TAGGAGGACC CAGGTTCAAT TCCCTGCTGC AACTTGTTTC AGAGCAACTG
  TTTATAACTC TACCCACCCA GAGATTCCAA CACTCCTTTT CAGCACTCAT GAGCACTATA
  Y
  CCTTGATGCA CAAACACACC TGCAGGCAAA ATACCCACAC ACCTAACATT TAGAAGTAAA
  ACATCAATAA ATAACAAGTA AAACTGGGGC TATGAATGGA GCTCAGTGGT ACACTGTCCG
  CTCAACCTGC ATAGAGCCTT GGATTTCACT CTAAATGCCA TAAAGAAAGT AACCCCCACA
  CAAGGAAAAG AGCTTTTTGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45389434	mCV24343954	ABI	CRAMUS_MOUSE	f	SNP		C	T
ss134829238	ENSMUSSNP4880472	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	T
ss320717640	CHEV_3_38178439	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs30052471					SNP	T	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:38333666 () rs orientation: forward

Symbol	Name	Function Class
Rr575652	regulatory region 575652	504 bp proximal