rs30055549 SNP Detail

Summary

• ID
  rs30055549
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:147976558 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGGACTGAA AAGGTAATCA
  GGATTCAAGT GTCTTGAAGC TTACAATTGG GATTTGTGCT TCAAAGCCTT AGATACTTAG
  AAAGAAAGCC CCTCTGTATG CCTTAAAATG GTCCAAAAGT CTAATCACCA ACTTGAGAGA
  GTAGATACTG CTGCTAGTCA GAGTGTGGCA GATACAGAGA GAACCCAGAA AGACCCCTCT
  M
  GTCTCTAAGT AAATAAATCT ACTTTCATTG TTTACATTAA TGGGCTCTGG AATCTACCCA
  AATGTGATTG AAATCAAAGT ATCCTTTACA CATCCCAAAT ATACTGCATT CATCTTTATC
  CCTGGGCACC AGTAGCCGGT TTATGCAGTG TTTTAATTGT TTATTTTATT AAACCACATA
  GAACAGGCTA TACTGCCTTT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45389748	mCV22801856	ABI	CRAMUS_MOUSE	f	SNP	A	C	C	C
ss136057863	ENSMUSSNP3581717	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C		C
ss321014825	CHEV_3_147933886	CHEVERUD	SCREENING_POP	f	SNP					C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30055549					SNP	A	C	C	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:147976558 () rs orientation: forward

Symbol	Name	Function Class
Rr587183	regulatory region 587183	1034 bp proximal
Rr587184	regulatory region 587184	1648 bp proximal