rs30056934 SNP Detail

Summary

• ID
  rs30056934
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:50594987 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACCGG TCCTTCCCCT ACTTTACTCC
  K
  AATTTTTAAC CTATTTCCCA AATCA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45524914	mCV24455349	ABI	CRAMUS_MOUSE	f	SNP		G	T					T
ss49595941	NES12915938	PERLEGEN	MM_PANEL2	f	SNP	G			G	G	G	T			G	G	G		T
ss135164062	ENSMUSSNP265954	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	T					T
ss320758974	CHEV_3_50444460	CHEVERUD	SCREENING_POP	f	SNP									T				G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs30056934					SNP	G	G	T	G	G	G	T	T	T	G	G	G	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49595941	NES12915938	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:50594987 () rs orientation: forward

Symbol	Name	Function Class
Rr576165	regulatory region 576165	202 bp distal
Rr576166	regulatory region 576166	370 bp proximal