rs30056935 SNP Detail

Summary

• ID
  rs30056935
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:50594965 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTGCAGCCA GCCCAGCCAC
  AAGTGAAGCC TCATTTGGCC CAAGCCATTG GTAACTTTCA AATGACAGAC AAATTGATAA
  CAAAAACTAT TCTAATTTTA ATGTCCCACG GGAGGATGAT ATAGACAGAG CCAGGTGATG
  CTGTTCTGCA AGTCACTGGG AAAGCATCTC CATGTCCACT GGCAGCCTGA TGTTCTTACC
  R
  GTCCTTCCCC TACTTTACTC CGAATTTTTA ACCTATTTCC CAAATCAGGC CTATAATTCT
  GTATATTTTT CTCCGATTCT ATTTGTCTAG AATTTATCTG TCTTTTCCTG AGCAGAGATT
  CCTACTAGGT CATTCTTTTC ATGGTATGTC TCTGACTCTT CTGCTTATCG GAGTCACCAT
  AATTTGCTGT GTGAGTGAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	MOLF/EiJ	NZW/LacJ
ss49595942	NES12915937	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	A	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	MOLF/EiJ	NZW/LacJ
rs30056935					SNP	G	G	G	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49595942	NES12915937	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:50594965 () rs orientation: forward

Symbol	Name	Function Class
Rr576165	regulatory region 576165	180 bp distal
Rr576166	regulatory region 576166	392 bp proximal