TCTCACTTAA GTTTGCCAAC TGCCTTGCAT TCGCCCTCGG GGCTGCGCTG CCTCCGGCGC GTGGGGGCGG GCACCTCGGA AACTGGAAAG ACAGCCAGAG AGCTCGCTGG GTCCCGCTTT CCCATAGGAG GTACTGTCCC ACTTCCAGCC AGCTTCCGCC CCCGACGCGC CCAGGCTCTG GGTGCTTCCT CGCGTCACCA CCAACCTCAC TCCCGGCCCT GGGGGTAGTG CCCTAGTGAC ACCAGGACCT TAACTATTCT ATTCGTTGGT GGCAGTAACC GGGGTGGTCA TCCTAACTTT Y TCCAGCGAAT GTTCACTGGC TTGCCAGCCA GGCCTGAGAC CCAAGGCCAG GAAGAACCGA TGGAGCCAGA TCGCAGCAGT GCGCCCAAGT GCCTGGAGAC AACCTCGCCG GGTCCTTGCG TGCGTCATTG GAATTTGCCT CTATGTTTCA ATTCAGCTGT GGGGAGTCCT GCCTCAACTA TTTGTTCCTT CTTTCCATGT TGCCTGTCTT ACCCCCCTTA CCCCCGCTCC GAGGCTTTTA TCATTTTGTG CCACAATAGG AACCATCCAT CAAGTTGTAA TTTACAAGGA ATGTCAAATA Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
C57BL/6J |
---|---|---|---|---|---|---|---|---|
ss39643085 | mCV25032230 | ABI | CRAMUS_MOUSE | f | SNP | C | C | T |
SNP Consensus Information | ||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
C57BL/6J |
||||
rs30063876 | SNP | C | C | T |
Location: Chr18:15198092 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Cpgi9734 | CpG island 9734 | within coordinates | ||||||
Gm58434 | predicted gene, 58434 | within coordinates | ||||||
Kctd1 | potassium channel tetramerisation domain containing 1 | Intron | ||||||
mRNA-UTR | ||||||||
Rr393314 | regulatory region 393314 | 580 bp upstream | ||||||
Rr534350 | regulatory region 534350 | 1021 bp distal | ||||||
Tssr152510 | transcription start site region 152510 | 1418 bp upstream | ||||||
Tssr152511 | transcription start site region 152511 | 1380 bp upstream | ||||||
Tssr152512 | transcription start site region 152512 | 921 bp upstream | ||||||
Tssr152513 | transcription start site region 152513 | 895 bp upstream | ||||||
Tssr152514 | transcription start site region 152514 | 880 bp upstream | ||||||
Tssr152515 | transcription start site region 152515 | 809 bp upstream | ||||||
Tssr152516 | transcription start site region 152516 | 700 bp upstream | ||||||
Tssr152517 | transcription start site region 152517 | 679 bp upstream | ||||||
Tssr152518 | transcription start site region 152518 | 661 bp upstream | ||||||
Tssr152519 | transcription start site region 152519 | 592 bp upstream | ||||||
Tssr152520 | transcription start site region 152520 | 559 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 07/22/2025 MGI 6.24 |
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