rs30065952 SNP Detail

Summary

• ID
  rs30065952
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:6007362 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TACAAATACC CAGGTAAAGA TTCCATGGGA CAAGGTATAT
  ATATATGTCA AGTAAAGCAG GCCTTTTGAA GTTCTTGGCG CAGGAAGCCA TTCAGCCTTT
  K
  TAATTAAGGA TCCTAAGGCT GGAGGACATG AAGGAGAAGC ACAGAAGGCT AGGACTTTTT
  GTGGGAGGGG ACAGGGGAAT TTCCTTTGGG TGGTGTTGT                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45890915	mCV23814390	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	G	T
ss132941184	ENSMUSSNP1267019	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G		T
ss321730897	CHEV_6_5957362	CHEVERUD	SCREENING_POP	f	SNP						T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30065952					SNP	G	G	G	G	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:6007362 () rs orientation: forward

Symbol	Name	Function Class
Cpgi17134	CpG island 17134	904 bp distal
Dync1i1	dynein cytoplasmic 1 intermediate chain 1	Intron
Rr407096	regulatory region 407096	753 bp distal
Rr626192	regulatory region 626192	678 bp distal
Rr626193	regulatory region 626193	1523 bp distal