rs30066094 SNP Detail

Summary

• ID
  rs30066094
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:41184570 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  ATGCTGCCCA AGCATCATCA CCTTCAGAAA GAGCTGCCCT TCTTCTCAGG AGGAATGTTG
  AAGACACTGG CAAATTACTG AGAGTGATAA TGTTCTCCCA GGCTCAGCAA TGGTGGGCAC
  CCTGCTATCA TTCTCTGACG GGTTTCTCAG ACTTGAGGAC AGTTGAACTC TTTAAATATC
  TGTCTGTCTA TCTATCTATC TATCTATCTA TCTATCTATC TATCTATCTA TCTATCCATC
  CATCCATCCA TCCATCCATC CATCCATCCA TCCATCCATC CATCCATCTA TCTATCTATC
  Y
  ATCTATCTAT CTATCTATCT ATCTATCTAT CTATCTATCT ATCTATCTAT CTATCTATCT
  ATCATCTATA TCTATCTATC TATCTATCTA TCTATCTATC TATCTATCTA TCTATCTATC
  TATCTATCTA TCATCTCTAT CTATCTATCT ATCTATCTAT CTATCTATCT ATCTATCTAT
  CTATCTATCT ATCTGTGTGT GCCTGCTTGT TTGTATGTGC ATTACATGTA TCAATGTGCT
  CTTGGAGGCT AGAAGAGGGT ATTGGATACC CTGTAACTGG AGTTACAGGT ATTTGTAAGC
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45393406	mCV24790037	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs30066094					SNP	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:41184570 () rs orientation: forward

Symbol	Name	Function Class
Gm64942	predicted gene, 64942	within coordinates
Rr575921	regulatory region 575921	1190 bp distal
Rr575922	regulatory region 575922	1468 bp distal