rs30069464 SNP Detail

Summary

• ID
  rs30069464
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:66056824 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGGT AGCGTTGTTA ATCAGTGGTG
  Y
  TGGTCAGACT GCATGGCTGC ATGCA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss39644681	mCV23206774	ABI	CRAMUS_MOUSE	f	SNP	C	T
ss147322701	ENSMUSSNP2329662	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
ss325658636	CHEV_18_66083407	CHEVERUD	SCREENING_POP	f	SNP			T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs30069464					SNP	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:66056824 () rs orientation: forward

Symbol	Name	Function Class
Gm50118	predicted gene, 50118	1385 bp downstream
Gm50119	predicted gene, 50119	303 bp downstream
Rr346799	regulatory region 346799	1224 bp distal
Rr346800	regulatory region 346800	577 bp proximal
Rr353052	regulatory region 353052	1423 bp distal
Rr353053	regulatory region 353053	976 bp proximal
Rr393825	regulatory region 393825	460 bp upstream