rs30070889 SNP Detail

Summary

• ID
  rs30070889
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:37719977 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGAGTGGCCA TCTCTGGTGG CATCCTGCAT CTCTCCCCCC
  AACCCCCAGC AATTCCTTTA GGCTCCAACC TAGCACCAGC TTGCATTGCC ACTGTCTGTG
  Y
  ACAGTCAGCC TCTTCCCCTC TCTCTTCTCC CTGTTCTTCT CTGTTTCTCT ACTTTCTCTG
  CCTCTACCCC TTTCCCAGAC CTGCTCCCCA CAGCACCGA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss45393464	mCV25186179	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss134810550	ENSMUSSNP362151	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		T
ss320711610	CHEV_3_37564750	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs30070889					SNP	C	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:37719977 () rs orientation: forward

Symbol	Name	Function Class
Rr575535	regulatory region 575535	460 bp proximal
Rr575536	regulatory region 575536	1787 bp proximal