rs30074622 SNP Detail

Summary

• ID
  rs30074622
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:75990012 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTTA CTTGAGCTTT AGTGCGACTT
  R
  AATGGTTTTC TCTGGGATCT TGGTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss39148459	mCV22680581	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss144639191	ENSMUSSNP4739646	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss324437245	CHEV_13_75979341	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs30074622					SNP	A	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:75990012 () rs orientation: forward

Symbol	Name	Function Class
Glrx	glutaredoxin	within coordinates
Rr482793	regulatory region 482793	1973 bp distal
Rr482794	regulatory region 482794	76 bp proximal
Rr482795	regulatory region 482795	1873 bp proximal
Tssr120402	transcription start site region 120402	1965 bp downstream
Tssr120403	transcription start site region 120403	1849 bp downstream
Tssr120404	transcription start site region 120404	1808 bp downstream