rs30075446 SNP Detail

Summary

• ID
  rs30075446
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:19959405 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTTCCATGC CTCGGGGTCG
  AAACTACTGT CTCCTGCATG AGATACATTT CGATCAGGAG CTCCGCCATT ATGGCTCCAC
  CATGTGGTCA ACACCTCTGG CTCCTGCGGG AGATATGTGT CAGCCTGGAG CTCTGTCATT
  AAACTACCTC ATGTTTTACA TCAAGATGGT CGTCTTTTCG TGATTCTTGG GTGCAAGCTG
  W
  ACAGGAATTG AGTGGAGGTT TCTCCACTAG GTTCTTTCAT TTGGAGGCCC CAGCGAGATC
  TGCGTGACAC CCAGGAACCC CGAAAGACCC CTTGGAGGTA CATTTGTTTG TGTGCGTCTT
  ACATGTTGTC TGTTGTCTAA GTGTGGCACC ACTGAATTTG TGTCTTGGTT TGTGAATTTG
  TGTCTTGGTT TGTGAATTTG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J
ss45892483	mCV24720400	ABI	CRAMUS_MOUSE	f	SNP	A	A	T
ss133058574	ENSMUSSNP662889	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J
rs30075446					SNP	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:19959405 () rs orientation: forward

Symbol	Name	Function Class
Rr379021	regulatory region 379021	within coordinates